ABSTRACT

Molecular biologists are performing increasingly large and complicated experiments, but often have little background in data analysis. The book is devoted to teaching the statistical and computational techniques molecular biologists need to analyze their data. It explains the big-picture concepts in data analysis using a wide variety of real-world molecular biological examples such as eQTLs, ortholog identification, motif finding, inference of population structure, protein fold prediction and many more. The book takes a pragmatic approach, focusing on techniques that are based on elegant mathematics yet are the simplest to explain to scientists with little background in computers and statistics.

part |2 pages

SECTION I: Overview

chapter 2|28 pages

◾ Statistical Modeling

chapter 3|10 pages

◾ Multiple Testing

part |2 pages

SECTION II: Clustering

part |2 pages

SECTION III: Regression

chapter 7|24 pages

◾ Univariate Regression

chapter 8|16 pages

◾ Multiple Regression

part |2 pages

SECTION IV: Classification

chapter 10|22 pages

◾ Linear Classification

chapter 11|16 pages

◾ Nonlinear Classification

chapter 12|16 pages

◾ Evaluating Classifiers