ABSTRACT

Protocol 10.1: Isolation of cytosolic extracts 265

Protocol 10.2: Isolation of soluble membrane extracts 265

Protocol 10.3: Isolation of mouse liver mitochondria 266

Protocol 10.4: Isolation of mitochondria from cultured cells 267

Protocol 10.5: Induction of permeability transition (PT) in isolated mitochondria

Protocol 10.6: Induction of mitochondrial outer membrane permeabilisation

10.3 Detecting the translocation of proteins to and from mitochondria in cells

Protocol 10.7: Cellular fractionation to detect cytochrome c release

Protocol 10.8: Detection of apoptosis inducing factor 273

Protocol 10.9: Detecting adenylate kinase 274

Protocol 10.10: Measurement of protein translocation by immunocytochemistry

Protocol 10.11: Quantitative analysis of cytochrome c-GFP redistribution in cells by flow cytometry

10.4 The impact of mitochondrial outer membrane permeabilisation on mitochondrial function

Protocol 10.12: Measurement of ∆Ψm in live cells 280

Protocol 10.13: Measurement of ∆Ψm in cells that are to be fixed 280

Protocol 10.14: ATP measurements in cells 281

Protocol 10.15: Measurement of oxygen consumption by isolated mitochondria

Protocol 10.16: Measurement of oxygen consumption in permeabilised cells

Protocol 10.17: Measurement of reactive oxygen species in intact cells

10.5 Physical changes in mitochondria 286

Protocol 10.18: Measurement of complex III accessibility 287

Protocol 10.19: Measurement of complex IV accessibility 287

Protocol 10.20: Measurement of mitochondrial swelling 288

Protocol 10.21: Detection of PT in isolated mitochondria using calcein-AM fluorescence

Protocol 10.22: Detection of PT in cells using calcein-AM fluorescence

Protocol 10.23: Determination of mitochondrial mass 290

10.6 References 290

10.1 Introduction

Mitochondria are complex energy-producing organelles enclosed by an inner and an outer membrane. During apoptosis, the outer membrane becomes permeable and proteins contained within the mitochondrial intermembrane space are released into the cytosol. These include cytochrome c, AIF, SMAC (also known as DIABLO) and htrA2, all of which have been shown to exert pro-apoptotic activities. Oncogenes such as Bcl-2, which prevents permeabilisation of the outer membrane and the release of intermembrane space proteins, block apoptotic cell death and

Cell Proliferation and Apoptosis, David Hughes and Huseyin Mehmet (Eds) © 2003 BIOS Scientific Publishers Ltd, Oxford

maintain the clonogenic potential of the cell. In contrast, inhibition of apoptosis downstream of mitochondrial outer membrane permeabilisation only delays eventual cell death. Mitochondrial outer membrane permeabilisation has therefore received much interest as a critical point of regulation in the apoptotic process. In this chapter we will discuss some of the studies that have established a role for mitochondria in apoptosis and the methods that have been used to dissect some of the complex issues surrounding mitochondrial outer membrane permeabilisation.