ABSTRACT

Bayesian Modeling in Bioinformatics discusses the development and application of Bayesian statistical methods for the analysis of high-throughput bioinformatics data arising from problems in molecular and structural biology and disease-related medical research, such as cancer. It presents a broad overview of statistical inference, clustering, and c

chapter 1|26 pages

Estimation and Testing in Time-Course Microarray Experi- ments

ByC. Angelini, D. De Canditiis, M. Pensky

chapter 2|36 pages

Classification for Differential Gene Expression Using Bayesian Hierarchical Models

ByNatalia Bochkina, Alex Lewin

chapter 3|32 pages

Applications of MOSS for Discrete Multi-Way Data

ByAdrian Dobra, Laurent Briollais, Hamdi Jarjanazi, Hilmi Ozcelik, and He´le`ne Massam

chapter 4|28 pages

Nonparametric Bayesian Bioinformatics

ByDavid B. Dunson

chapter 5|26 pages

Measurement Error and Survival Model for cDNA Micro- arrays

ByJonathan A. L. Gelfond, Joseph G. Ibrahim

chapter 6|16 pages

Bayesian Robust Inference for Differential Gene Expression

ByRaphael Gottardo

chapter 7|28 pages

Bayesian Hidden Markov Modeling of Array CGH Data

BySubharup Guha

chapter 8|40 pages

Bayesian Approaches to Phylogenetic Analysis

ByMark T. Holder, Jeet Sukumaran, Rafe M. Brown

chapter 9|22 pages

Gene Selection for the Identification of Biomarkers in High- Throughput Data

ByJaesik Jeong, Marina Vannucci, Kim-Anh Do, Bradley Broom, Sinae Kim, Naijun Sha, Mahlet Tadesse, Kai Yan, Lajos Pusztai

chapter 10|16 pages

Sparsity Priors for Protein–Protein Interaction Predictions

ByInyoung Kim, Yin Liu, Hongyu Zhao

chapter 11|22 pages

Learning Bayesian Networks for Gene Expression Data

ByFaming Liang

chapter 12|24 pages

In-Vitro to In-Vivo Factor Profiling in Expression Genomics

ByJoseph E. Lucas, Carlos M. Carvalho, Daniel Merl, Mike West

chapter 13|26 pages

Proportional Hazards Regression Using Bayesian Kernel Machines

ByArnab Maity, Bani K. Mallick

chapter 14|22 pages

A Bayesian Mixture Model for Protein Biomarker Discovery

ByPeter Mu¨ller, Keith Baggerly, Kim Anh Do, and Raj Bandyopadhyay

chapter 15|28 pages

Bayesian Methods for Detecting Differentially Expressed

ByGenes Fang Yu, Ming-Hui Chen, Lynn Kuo

chapter 17|18 pages

Bayesian Classification Method for QTL Mapping

ByMin Zhang