Multistrand RNA Secondary Structure Prediction and Nanostructure Design Including Pseudoknots*

doi:10.1201/9781003122005-6

Chapter

Multistrand RNA Secondary Structure Prediction and Nanostructure Design Including Pseudoknots*

ABSTRACT

We are presenting NanoFolder, a method for the prediction of the base pairing of potentially pseudoknotted multistrand RNA nanostructures. We show that the method outperforms several