ABSTRACT

By applying infrared spectroscopy for dry DNA, we can conveniently

obtain information on conformation, content of hydrated water

molecules, and hydration structure. In the regulated base-pair

sequence of poly(dG)–poly(dC) double strand, the characteristic

absorption band emerges at 1400 cm−1 in contrast to poly(dA)– poly(dT) and natural DNA. Through the spectral difference from Li-

DNA and Na-DNA with monovalent counterions, the intercalation of

divalent and trivalent metallic counterions into natural DNA yields

a novel N-M bonding in the base molecules. Around the negatively charged phosphate group, disappearance of such counterions is

found to induce anisotropy against the electric dipole and to

drastically change the hydration structure.