ABSTRACT

Bimax (binary inclusion-maximal biclustering algorithm) is a biclustering algorithm introduced by Prelic et al. (2006) as a reference biclustering method for a comparison with different biclustering methods. They advocate its use as a preprocessing step, to identify potentially relevant biclusters that can be used as input for other methods. The main benefit of Bimax, according to Prelic et al. (2006), is the relatively small computation time, while still providing biologically relevant biclusters using a simple data model. Similar to Chapter 4 the analysis is conducted using the BiclustGUI package. In this chapter we focus on the script window.