ABSTRACT

No doubt, comparative molecular eld analysis (CoMFA) [38] is the most popular and widely used 3D-QSAR method. After the limited success of dynamic latticeoriented molecular modeling system (DYLOMMS) [39], CoMFA could be widely spread, thanks to the introduction of an efcient statistical tool, partial least squares (PLS) regression, and the increased opportunities to handle molecular structures on computers, giving birth to a turnkey package included in SYBYL and provided by TRIPOS [125]. More than 20 years after its inception in 1988, CoMFA (and the neighboring approach comparative molecular similarity analysis [CoMSIA]) [40] remains a reference to which nearly all newly proposed methods are compared.